TAGC latest news

Malaria Genomics Workshop at Mount Kenya University, November 4–6
Malaria Genomics Workshop at Mount Kenya University, November 4–6
The team travels to the ESOVE conference in Valencia
The team travels to the ESOVE conference in Valencia
New TB-Profiler version published in Genome Medicine
New TB-Profiler version published in Genome Medicine
  1. 1 Malaria Genomics Workshop at Mount Kenya University, November 4–6
  2. 2 The team travels to the ESOVE conference in Valencia
  3. 3 New TB-Profiler version published in Genome Medicine

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Work we're about to release.

  • New work on Aedes aegypti
  • New tick genomes
  • New sandfly genomes

Past news

Drug resistant Klebsiella

Klebsiella pneumoniae (Kp) Gram-negative bacteria cause nosocomial infections and rapidly acquire antimicrobial resistance (AMR), which makes it a global threat to human health. It also has a comparatively rare hypervirulent phenotype that can lead to severe disease in otherwise healthy individuals. In recent work by Anton et al., involving 13k publicly available sequenced Kp isolates and 2k hypervirulent strains, we analyzed the plasmid replicons and carbapenemase and siderophore encoding genes to understand the movement of hypervirulence and AMR genes located on plasmids. The large-scale analysis reveals outbreaks and movement of hypervirulent strains, including in China.

Susana Campino

Infectious disease 'Omics

Our Infectious Disease ‘omics course was hosted by the Royal Veterinary College, with many participants online. The Alan Turing Institute sponsored RVC places on the course. Specifically, this course offers hands-on experience of processing sequencing data to construct genomes, identifying genomic variants and applying downstream methods, such as phylogenetics.

Taane Clark

Infectious disease 'Omics Vietnam

We co-organised an Infectious disease ‘omics symposium and data analysis workshop in the National Institute of Malariology, Parasitology and Entomology (NIMPE, Ministry of Health), Hanoi, Vietnam. Participants came from around Vietnam, and included staff within the national malaria control programme, who are starting to apply sequencing-based technologies to inform surveillance activities. The meeting was part funded by an MRC grant.

Taane Clark